SMAL web-server source code

  • Version 1.1 (last updated May 2016): tgz

List of PPINs, PNAs and MNAs

  • PPINs used in our studies (8 species): tgz (0.5MB)
  • Archive of alignments created using IsoRankN: tgz (7.6MB)
  • Archive of alignments created using NETAL: tgz (6.1MB)
  • Archive of alignments created using PINALOG: tgz (5.0MB)
  • Archive of alignments created using SMETANA: tgz (10.9MB)

Complimentary files

  • BLAST bit scores (E-value < 10-5) for pairs of proteins (single file): gz (17.1MB)
  • BLAST bit scores for specific networks (use for SMETANA PNA generation): tgz (8.1MB)
  • Schlicker funSim score for pairs of aligned proteins: gz (14.1MB)
  • NCBI HomoloGene IDs for proteins: gz (0.4MB)